OPINION
ROBINSON, Judge:
This military pay case is before the court on defendant’s motion to dismiss or in the alternative for summary judgment, and plaintiff’s cross-motion for summary judgment. Briefing of the issues is complete. Oral argument was held on November 8, 1989. Thereafter, by agreement of the parties, the case was stayed by order of the court for an indefinite period to permit a final determination and issuance of a judg[10]*10ment in Tilley v. United States, 19 Cl.Ct. 33 (1989), a similar case which was also pending before this court. That stay order was lifted by a subsequent order of this court after the court’s decision in Tilley became final. For reasons hereafter set forth, defendant’s motion to dismiss or in the alternative for summary judgment will be denied, and plaintiff’s cross-motion for summary judgment will be granted in part with the remaining issue of the validity of plaintiff’s Officer Effectiveness Report (OER) for the period August 6, 1982 through February 5, 1983 (February 1983 OER) remanded to the AFBCMR pursuant to RUSCC 60.1(a)(1).
FACTS
Plaintiff, Technical Sergeant (TSgt.) Steven E. Gifford, is an active duty member of the Regular Air Force and is currently in Saudi Arabia participating in Operation Desert Storm. Plaintiff originally enlisted in the Air Force in December 1977. It is not disputed that his three years of service immediately following his enlistment were superb.
After unsuccessfully applying to Officer Training School (OTS) a number of times, plaintiff submitted an application with a request for several follow-on assignments, one of which was missile launch duty. He was accepted and later graduated from OTS as Distinguished Graduate. On February 23, 1982, plaintiff was appointed a Second Lieutenant in the Reserve of the Air Force and voluntarily ordered to active duty.
Plaintiff’s first assignment shortly after graduation from OTS was to Vanderberg AFB, California, for Missile Combat Crew Initial Qualification Training (IQT). While stationed at Vanderberg, plaintiff excelled in his overall performance in IQT. In May 1982, plaintiff first learned the specifics of the highly classified Emergency War Order (EWO) and Single Integrated Operation Plan (SIOP), which address this country’s nuclear weapons policies and various targeting options for their implementation. He was informed, among other things, that such implementation, contrary to his prior understanding of this country’s nuclear policy, could mean that this country might launch an offensive or preemptive nuclear first strike, as opposed to a purely defensive nuclear strike. Further, he was informed of the possibility of such a nuclear strike being made against non-military or purely civilian targets.
After plaintiff, in conformity with the requirements of AFR 35-99,1 reported his ethical aversion to such nuclear targeting strategies to the Personnel Reliability Program (PRP) Monitor, he was promptly interviewed by a flight surgeon, a legal officer, and a chaplain. During these interviews, plaintiff reaffirmed his doubts concerning these policies and their implementation.2 As a direct result of these expressions of moral compunction respecting this use of nuclear weapons, he was suspended from IQT on May 25, 1982 until his PRP status could be resolved. On June 4, 1982, he was permanently decertified under the PRP and eliminated from the IQT program. He was sent to Grand Forks AFB, North Dakota, where he performed full-time duties unrelated to the missile launch program.
On July 9, 1982, Lt. Col. Gary Nelson,3 Commander, 448th Strategic Missile Squadron, Grand Forks AFB, recommended that discharge proceedings be initiated against plaintiff under AFR 36-2, ¶ 4c, rather than AFR 36-3, because plaintiff “volunteered” for missile duty, and because he believed that plaintiff had always had reservations about missile duty, but accepted that assignment as an ulterior means of earning a [11]*11Master’s degree, and after exiting from missile duty, attaining a chaplaincy.
Thereafter, on July 17, 1982, discharge action under AFR 36-2 was initiated against plaintiff by Col. Frank B. Horton, III, Commander, 321 Strategic Missile Wing, Grand Forks AFB.4 The basis for the action was plaintiff’s elimination from IQT “by reason of factors over which [he] had control.” Col. Horton alleged that plaintiff “entertained reservations about missile duty when [he] volunteered for such duty and when [he] applied for Officer Training School and when [he] accepted [his] commission.” Plaintiff was specifically notified that AFR 36-2, ¶ 4c was the reason for the discharge action, he was given a copy of this regulation and invited to “familiarize” himself with that regulation for an understanding of the various procedures, rights, and options it provided.
On August 31, 1982, plaintiff was notified that a Selection Board had convened under Section C, AFR 36-2 and determined that he be required to show cause for retention (show cause) in the Air Force. The charge was that he had failed to complete a military training school, where attendance “was at government expense and the failure to complete training was reasonably traced to factors over which he had control.” He was again referred to AFR 36-2 for information as to procedures, rights, and options.
A Board of Inquiry (BOI) convened on November 4, 1982 pursuant to Section D, AFR 36-2, to consider whether plaintiff should be discharged because his failure to complete IQT was due to factors over which he had control. Before the BOI, three North Dakota officers testified in favor of plaintiff’s discharge,5 and six other officers testified in favor of his retention. Since the issue was framed under AFR 36-2 as to whether plaintiff had control over his disqualification from IQT, their testimony collectively related to plaintiff’s morals, ethics, and honesty.
Plaintiff testified that what he had learned during IQT was of such magnitude that he was “morally unable” rather than “unwilling” to “turn the key” knowing that the deaths of untold innocent civilians would result. He further testified, that an officer’s oath encompasses an overriding responsibility to insure that he acts morally, ethically, legally, and with integrity. However, the BOI concluded that plaintiff had failed to complete IQT because of reasons over which he had control. It determined he should not be retained and recommended a general discharge under honorable conditions.
On February 25, 1983, the Air Force Board of Review convened, pursuant to AFR 36-2 112, found that plaintiff had failed to establish cause for retention and recommended an honorable discharge pursuant to AFR 36-2.
On May 25, 1983, the Secretary of the Air Force (Secretary) directed that the AFR 36-2 proceeding against plaintiff be terminated and “by direction of the President,” he ordered that plaintiff’s appointment be terminated pursuant to AFR 36-3 and that he be honorably discharged effective June 30, 1983. He was discharged on that date with a DD 214 reflecting an “Involuntary Discharge: Substandard Performance.” 6
[12]*12Plaintiff had received a February 1983 OER, covering his duty assignment at Grand Forks AFB. One rater, Maj. Douglas D. Greathouse, was highly complimentary of his performance and potential, while plaintiff’s additional rater, Lt.Col. Nelson, rated him far below standard. Lt. Col. Nelson premised his low rating upon plaintiff’s statement that “he could not perform the missile duties for which he was being trained.” Plaintiff, upon pursuit of OER appeal procedures, in rebuttal, argued that Lt.Col. Nelson’s comments were inappropriate because he had not observed his performance during the rating period—his rating was based upon an incident which arose outside the rating period—and Lt. Col. Nelson had presumed that plaintiff was guilty of misconduct under AFR 36-2 before a decision had been made in that proceeding.
Plaintiff’s indorser, Col. Charles P. McAndrews, reviewed plaintiff’s rebuttal and concurred with Lt.Col. Nelson. Col. McAndrews stated, “I have personal knowledge of the factors affecting his performance during the period of this report, including his qualification of duties during testimony on November 4, 1982. I conclude that his future service in the Air Force in any capacity is untenable.” The Officer Personnel Records Review Board, upon review of plaintiff’s appeal and pursuant to AFR 31-11,7 refused plaintiff’s request to delete the ratings and comments of Lt.Col. Nelson and Col. McAndrews, or the OER itself, and denied the appeal.
On or about August 1, 1983, or approximately one month after plaintiff’s discharge, plaintiff was informed that pursuant to AFR 36-3, he was authorized to enlist in the Air Force in the grade of staff sergeant—the rank he held prior to attending OTS. He did re-enlist and it is unchallenged that since that time his performance has been of the highest caliber.
On June 18, 1986, plaintiff submitted an application to the Air Force Board for the Correction of Military Records (AFBCMR or Correction Board) pursuant to 10 U.S.C. § 1552, seeking, among other things, vacation of his discharge, reinstatement as an officer, correction of his records to show continuous active duty service as an officer, and deletion of the February 1983 OER. He argued that: his discharge under AFR 36-3 was legally null and void since none of the requirements of that regulation were satisfied; his discharge was void because he was denied the “elementary due process right” to a hearing on the real reason for his ultimate discharge; the recommendation of the BOI was, in any event, unsupported by the evidence; his discharge was unjust and unwarranted by the circumstances; and, the contested OER should be deleted from his personnel records because it reflects events outside the rating period, refers to as-yet incomplete administrative actions, is not based upon actual observations by the rating chair, is inaccurate, and was generally prepared in violation of controlling regulations.
On October 21, 1987, plaintiff received notification that a majority of the AFBCMR8 had denied his application on the grounds that “insufficient evidence had been presented to demonstrate the existence of probable error or injustice.” The majority also concluded that: the proceedings were proper because the Secretary of the Air Force has “statutory authority to make rules and regulations to operate the Department of the Air Force;” the Secretary’s determinations are “final and conclusive;” plaintiff’s discharge under AFR 36-3 was “less derogatory” than one under AFR 36-2; and, no due process violations occurred because the hearing plaintiff received allowed for a “fair and balanced” determination. Thus, the AFBCMR concluded that the BOI had not abused its discretion; its proceedings did not violate AFR 11-31; plaintiff was not improperly [13]*13processed; the Secretary did not abuse his authority in ordering plaintiffs discharge pursuant to AFR 36-3; and, the February 1983 OER was proper because it “appeared” that the ratings were not erroneous or based on “improper considerations.”
Plaintiff filed his complaint in this court on December 18, 1987, alleging that his discharge was illegal and that the AFBCMR’s denial of his application was arbitrary, capricious, contrary to law, and not supported by substantial evidence. Plaintiff is requesting that this court grant the same relief he sought administratively, including a monetary judgment in the amount of back pay, and other entitlements denied him since June 30, 1983.
Defendant, in its motion, opposes the granting of all relief sought by plaintiff.
DISCUSSION
Since the court has considered matters presented by the parties outside of the pleadings, it must treat defendant’s motion to dismiss or in the alternative for summary judgment as a motion for summary judgment.9 The disposition of a case on motion for summary judgment is appropriate where there is no genuine issue as to any material fact and the movant is entitled to judgment as a matter of law. RUSCC 56(c). In evaluating a motion for summary judgment, the court is compelled to resolve any doubt about the existence of a genuine issue of fact in favor of the nonmoving party. Housing Corporation v. United States, 199 Ct.Cl. 705, 710, 468 F.2d 922, 924 (1972). In this case, neither party, in opposing the other party’s motion for summary judgment, has raised any genuine issue of material fact that would preclude summary judgment. Therefore, the court finds that the issue of liability in this case is ready for disposition on the parties’ cross-motions for summary judgment. Hodosh v. Block Drug Co., 786 F.2d 1136, 1141 (Fed.Cir.1986) cert. denied, 479 U.S. 827, 107 S.Ct. 106, 93 L.Ed.2d 55 (1986); Sweats Fashions, Inc. v. Pannill Knitting Co., 833 F.2d 1560, 1562-63 (Fed. Cir.1987).
In this case, defendant’s motion for summary judgment alleges that this court has no review power over plaintiff’s discharge because plaintiff’s commission was subject to termination “at the pleasure of the President” and this court “may not review” the discharge because it was “a matter committed solely to the discretion of the President.” Defendant next alleges that this court may not review the exercise of discretion to terminate plaintiff’s Reserve Officer commission for substandard performance.
Defendant alternatively argues, that even if this court can review plaintiff’s discharge proceedings, plaintiff cannot demonstrate by clear and convincing evidence that the AFBCMR’s decision to uphold the findings of the BOI, was arbitrary, capricious, not supported by substantial evidence, or contrary to law.
Contrary to plaintiff’s allegations, defendant contends that the AFBCMR found that the Secretary’s actions regarding discharge under AFRs 36-2 and 36-3 are final and conclusive. Defendant argues that Section A, II l.e. of both AFRs 36-2 and 36-3 gives the Secretary the authority to waive or grant exceptions to any provision of these regulations.10 Defendant argues that an agency’s interpretation of its regulations is entitled to great deference and that the Secretary acted reasonably in interpreting the regulations to permit plaintiff to be discharged for substandard performance under AFR 36-3 rather than the more serious charge of misconduct under AFR 36-2. Defendant contends that had plaintiff been discharged under AFR 36-2 he would have been ineligible for his subsequent reenlistment in the Air Force as a non-commissioned officer.
Defendant also alleges that because of the similarity of procedures for discharge under AFRs 36-2 and 36-3, plaintiff was not deprived of due process of law since he [14]*14received all of the procedural rights and protections afforded by AFR 36-2. Defendant contends that differences between the regulations are minor; that plaintiff had an opportunity to appear before a BOI; that he was represented by counsel; and, that there was adequate information for the AFBCMR reviewing authorities to make a fair and balanced determination in the matter.11
Further, defendant asserts the Correction Board concluded that nothing in the record indicates that the BOI abused its discretionary authority or that the BOI’s proceedings violated AFR 11-31.12 Defendant also argues that plaintiff’s discharge was not unjust or unwarranted. It argues that the AFBCMR found that the basis for plaintiff’s appointment as a commissioned officer was the Air Force’s need for Missile Launch Officers. Once plaintiff was terminated from that specialty code, the basis for his appointment was moot. The AFBCMR noted that plaintiff understood prior to his appointment that the needs of the service would determine whether or not he could remain on active duty if he failed to complete relevant training courses.13
Finally, defendant contends that with regard to plaintiff’s February 1983 OER, the AFBCMR found that the consideration of events which occurred outside of a rating period is not prohibited if they add significant information which has not been previously reported. Additionally, defendant argues that it is not unusual for the addition[15]*15al rater and indorser of an OER not to have personally observed the officer during the rating period.
In response, plaintiff argues that the Secretary’s discretionary right under Title 10 U.S.C. to discharge a Reserve Commissioned Officer is tempered by regulations which were enacted under that Title. Additionally, plaintiff alleges that he is attacking the discharge proceedings, rather than the discharge itself. Therefore, this court can review whether plaintiff’s discharge was proper.
Plaintiff argues that contrary to the Correction Board’s findings, his discharge under AFR 36-3 was null and void because it was accomplished without compliance with the requirements of that regulation. Plaintiff contends the AFBCMR’s decision ignored relevant legal authority which holds that the Air Force is bound by its regulations. Plaintiff alleges that the power to “enact regulations does not carry with it the absolute and unrestricted freedom to manipulate those regulations at will or change the entire basis/reason/authority for a discharge action that has already been processed to near-completion.” P’s. Br. pg. 1. Additionally, plaintiff submits that only reasonable interpretations by an agency of its regulations are entitled to deference by the court.
Plaintiff contends that defendant seeks to minimize plaintiff’s damages by portraying its actions as beneficial to plaintiff. In fact, plaintiff alleges that the AFBCMR acted in an arbitrary and capricious manner when it denied plaintiff relief, in part, because it felt plaintiff’s AFR 36-3 discharge was less derogatory than one under AFR 36-2. Plaintiff agrees that it was provided with the procedural protections of AFR 36-2. However, plaintiff submits that he was not discharged under that regulation. Plaintiff alleges that contrary to the requirements of AFR 36-3, his case was never referred to Headquarters (HQ) USAF, the Air Force Manpower and Personnel Center (AFMPC), nor was it considered by the Air Force Personnel Board (AFPB) which could have terminated the show-cause proceedings.14 Plaintiff claims that the AFBCMR ignored established precedent when it adopted the position that 10 U.S.C. § 8012 gave the Secretary the authority to change the basis for the discharge from AFR 36-2 to AFR 36-3.
Plaintiff also alleges that he was denied due process of law because he was not notified of the basis for his AFR 36-3 discharge. Plaintiff alleges that he was originally told that proceedings had been initiated against him under AFR 36-2 for misconduct in volunteering for missile duty when he entertained reservations against such duty at the time of his application to OTS and when he accepted his commission. Plaintiff was then notified that he must show cause before a Selection Board for retention since his failure to complete IQT was reasonably traced to factors over which he had control. Plaintiff contends that at the BOI the only issue addressed was whether or not he had control over his disqualification from IQT. Plaintiff alleges that he was unaware that his overall proficiency would be the official basis for discharge under AFR 36-3 until it was too late for him to address that issue. He argues that the Secretary’s action deprived him of his due process right to respond to the allegations against him. Plaintiff contends that the AFBCMR’s conclusion that there was sufficient evidence on the record to make a fair and balanced determination under AFR 36-3 was arbitrary and capricious and in error. Plaintiff alleges that he remains confused about which administrative determination, misconduct or substandard performance, he must refute.
Plaintiff also attacks the AFBCMR’s finding. He argues that it was arbitrary and capricious because it ignored the arguments he presented and denied him relief [16]*16based upon compliance with another regulation. Plaintiff alleges that the Board did not consider all of the relevant evidence it had before it. He also argues that the Correction Board “never wrote one word about whether the facts supported a finding of substandard performance.” Plaintiff argues that the facts do not support a conclusion that he was “guilty” of misconduct under APR 36-2 or of substandard performance under APR 36-3. Additionally, plaintiff alleges that the administrative proceedings were a sham because defendant was applying a “secret policy” whereby the Air Force considers an expression of a moral compunction against nuclear missile launch duties to be substandard performance.15
Finally, plaintiff argues that the Correction Board acted capriciously and erroneously when it rejected plaintiffs argument that his February 1983 OER should be expunged from his personnel records. Plaintiff alleges that the evidence showed that the challenged OER was defective because it included comments from one individual who admittedly had no personal contact with or knowledge of plaintiffs performance, referred to an incomplete and unsuccessful administrative proceeding, and included comments related to incidents from outside the rating period which had previously been reported in an earlier training report.16
Analysis
The court will first address whether it has the power to review plaintiff’s discharge.
The Congress has provided that:
Subject to other provisions of this title, reserve commissioned officers may be discharged at the pleasure of the President.
(Emphasis added.) 10 U.S.C. § 1162(a) (1982).
The President can discharge officers at his pleasure if accomplished in accordance with “other provisions” of Title 10. Under 10 U.S.C. § 8012(f) (1982), the Secretary has been delegated the authority to make rules and regulations to operate the Air Force. This provision authorized the promulgation of AFRs 36-2 and 36-3. These, and other regulations created under 10 U.S.C. § 8012(f), modify the Secretary’s discretion to discharge at will, reserve commissioned officers. Once regulations are enacted they have the force and effect of law and are binding on the Secretary. Buchanan v. United States, 223 Ct.Cl. 291, 621 F.2d 373 (1980). See also Service v. Dulles, 354 U.S. 363, 77 S.Ct. 1152, 1 L.Ed.2d 1403 (1957); Vitarelli v. Seaton, 359 U.S. 535, 79 S.Ct. 968, 3 L.Ed.2d 1012 (1959).17 The Air Force then must comply [17]*17with its own regulations. Thus, this court may determine whether an entitlement was properly terminated in accordance with applicable regulations, and by virtue of 37 U.S.C. § 20418 and 28 U.S.C. § 1491. Sanders v. United States, 219 Ct.Cl. 285, 594 F.2d 804 (1979).
In a related issue the court must address defendant’s argument that this court cannot review the exercise of discretion to terminate plaintiff’s commission for substandard performance. Defendant’s argument misconstrues plaintiff’s claim. Plaintiff is attacking the nature of the administrative proceedings which resulted in his discharge, and not the decision to discharge for substandard performance. This court can inquire into the procedural aspects of plaintiff’s discharge even though it cannot substitute its judgment for that of the Air Force in evaluating plaintiff's performance. Sargisson v. United States, 913 F.2d 918 (Fed.Cir.1990); Voge v. United States, 844 F.2d 776 (Fed.Cir.1988). “[Djischarge proceedings are reviewable when challenged on the basis that regulations have been violated.” Cohn v. United States, 15 Cl.Ct. 778, 789 (1988).
Next the court will proceed to the merits of plaintiff’s case. The first such issue is whether, by virtue of Section A, ¶11 l.e. of both AFRs 36-2 and 36-3 the AFBCMR, acting through the Secretary, impermissibly waived or misapplied the requirements of those regulations in affirming the discharge of plaintiff under AFR 36-3 for substandard performance.
While the Secretary clearly has some leeway under AFRs 36-2, 36-3, ¶¶ l.e., to make minor exceptions or exemptions from applicable Air Force regulations, the court cannot logically read that paragraph as permitting the Secretary to determine that all of the definitive protective procedures in AFR 36-3 had been adequately met when reviewing officials processed plaintiff’s discharge under the procedures established by an entirely separate and distinct regulation, AFR 36-2. “It is elementary that an agency must follow its own regulations, and that a discharge brought about in violation of those regulations is invalid and cannot stand.” Cruz-Casado v. United States, 213 Ct.Cl. 498, 502-03, 553 F.2d 672, 675 (1977). See also Service v. Dulles, 354 U.S. 363, 77 S.Ct. 1152, 1 L.Ed.2d 1403 (1957); Bray v. United States, 207 Ct.Cl. 60, 515 F.2d 1383 (1975).
If defendant’s argument is accepted, the Secretary would have the unfettered discretion to pick and choose among various pertinent regulations, and in so doing, completely ignore regulations which reviewing officials fully relied upon in processing an officer’s discharge. Moreover, simply by adding an exculpatory clause to a given regulation, the Secretary could elect to waive the definitive procedures set forth in that regulation. Such an interpretation is not reasonable because it would emasculate the procedural protections inherent in each regulation, an illogical result which is not entitled to any deference whatsoever by this court. Accordingly, the court concludes that Section A, H1I l.e., in AFRs 36-2 and 36-3 does not give the Secretary the discretion to unilaterally waive the definitive procedures set forth in one discharge regulation—which were carefully followed and relied upon by both reviewing authorities and the plaintiff—for those in another distinct and independent regulation having different procedures.
A second and related issue is whether there were material differences in the procedures of AFRs 36-2 and 36-3 which significantly prejudiced plaintiff’s rights [18]*18under applicable laws and regulations. The court agrees with defendant that most of the differences between the procedural aspects of these regulations, on the surface, appear to be minor. In fact, as defendant alleges in one instance, the procedures followed under AFR 36-2 prior to plaintiff's discharge under AFR 36-3 arguably may have provided a benefit to plaintiff.19 However, as the Federal Circuit stressed in Hanratty v. Federal Aviation Admin., 780 F.2d 33, 35 (Fed.Cir.1985), “To argue, ... that the main distinction between the two chapters ... favors Hanratty, and that therefore the Board’s holding here should be affirmed, is to miss the point.”
In Hanratty v. Federal Aviation Admin., 780 F.2d 33 (Fed.Cir.1985), the court considered an appeal from a Merit Systems Protection Board (MSPB) decision sustaining Hanratty’s removal from the Federal Aviation Administration (FAA) under 5 U.S.C. § 7513 for unacceptable performance. Hanratty’s removal could have been accomplished under either 5 U.S.C. § 7513 or 5 U.S.C. § 4303. His removal notice made no reference to which Section the removal proceedings would be based upon. During the hearing the presiding official repeatedly characterized the proceedings as under § 4303 and distinguished cases offered by appellant because they were based on § 7513. Four weeks after the hearing the presiding official entered his decision basing appellant’s removal on § 7513 and not § 4303.
The Federal Circuit held that the presiding official erred by recharacterizing, sua sponte, the removal action. “The Board may not simply substitute Chapter 75 for Chapter 43 or vice versa after the parties have presented their evidence. Whether doing so would favor the petitioner or the agency cannot be controlling, after-the-fact switches being inherently unfair and governing considerations under the two chapters being distinct.” Hanratty v. Federal Aviation Admin., 780 F.2d 33, 35 (Fed.Cir. 1985).
Hanratty is dispositive of this issue in this case. Here, discharge proceedings for misconduct were initiated and conducted pursuant to AFR 36-2. However, in his final decision, the Secretary, like the presiding official in Hanratty, based plaintiff’s discharge on a different regulation, AFR 36-3. Because plaintiff has had no opportunity to rebut a charge of substandard performance under AFR 36-3, the court cannot accept the Secretary’s inherently unfair decision.20
Moreover, the regulations themselves stress the importance of initiating discharge proceedings under the proper regulation.
AFR 36-2, § B, 112. Commander’s Responsibilities: 21
a. Evaluation of Information. Each commander will examine and evaluate any information received indicating that an officer under his or her jurisdiction should be considered for action under this regulation or under AFR 36-3. When a commander receives information which indicates that the reasons listed in both this regulation and AFR 36-3 are applicable in a case, the commander must weigh all the facts and circumstances and exercise extreme care and good judgment in evaluating all available evidence and documents [19]*19to ensure that action is initiated under the proper regulation____
(Emphasis added.)
This provision serves as clear notice that the two regulations are not willy-nilly interchangeable, and that it is extremely important for Air Force officials to initiate and prosecute a discharge under the proper regulation.
It is inescapable that the mere similarity of procedures established by these two regulations is not controlling and that under the precedent of Hanratty v. Federal Aviation Admin., 780 F.2d 33, 35 (Fed.Cir. 1985), the procedural differences are quite material and may not be ignored. The court therefore concludes that the Correction Board grievously erred in affirming the transformation of plaintiffs discharge from one for misconduct under AFR 36-2, to one for substandard performance under AFR 36-3.
The third issue presented is whether plaintiff’s due process rights were violated because of lack of adequate notice and lack of an opportunity to mount a defense against the charge of substandard performance set forth in AFR 36-3. Plaintiff professes confusion as to exactly what charges formed the basis for plaintiff’s dismissal. Plaintiff’s notification of initiation of action, dated July 17, 1982, stated that discharge procedures under AFR 36-2 had been initiated due to his elimination from IQT for factors “under plaintiff’s control.” Particularly, it was directed toward his statement that he would refuse to execute a validly authenticated order to launch nuclear weapons. At the BOI, Col. Horton testified that he initiated the proceedings under AFR 36-2 because plaintiff had eliminated himself from a Government funded course of instruction through factors over which he had control. Plaintiff maintains that his evidence at the BOI was accordingly addressed solely to the issue of whether he had control over his disqualification.
In defendant’s response to plaintiff’s cross-motion for summary judgment and reply to plaintiff’s opposition to defendant’s motion for summary judgment, defendant cited the reasons for plaintiff’s discharge as follows:
Discharging the plaintiff for substandard performance under AFR 36-3 was an ameliorative action on his part, as discharge under AFR 36-2 would have made the plaintiff ineligible to enlist in the Air Force.
Substandard performance of duty encompasses several different areas under AFR 36-3, including:
a. “Failure to demonstrate acceptable qualities of leadership required by an officer of his or her grade.” AFR 36-3, 114(a); and
b. “Failure (including lack of ability) to properly discharge assignments commensurate with grade and experience.” AFR 36-3, 114(c).
Lt. Gifford’s statements that he could not carry out a launch order due to national policy conflicting with his own beliefs definitely indicated a professed unwillingness to discharge the assignments of a missile officer. Further, his attitude does not demonstrate the qualities of leadership expected of an officer. (Emphasis added.)
Plaintiff alleges, and the court agrees, that this statement is in effect a clear concession from defendant that plaintiff was discharged, not because he was evidencing an intent to “pick and choose” among valid orders, but solely because of his compelled statement of moral concern. This moral concern was seen by the Air Force as proof of substandard performance of duty under AFR 36-3. Now, in its supplemental brief defendant alleges that the principle issue is the Secretary’s characterization of plaintiff’s failure to complete a training course due to his refusal on moral grounds, and failure to comply with lawful military orders, as unsatisfactory duty performance.
It is clear that at the BOI plaintiff presented evidence solely related to the issue of whether his failure to complete a training course was due to factors within his control. Plaintiff’s evidence at the BOI was directed toward proving that the mor[20]*20al ramifications of defendant’s nuclear policy left him no choice but to express—as the regulations compelled him to do—his unwillingness to launch nuclear weapons against purely civilian targets. The evidence he presented concerned the issue of whether or not he had control over the events that led to his failure to complete IQT. This testimony related to his moral character, the genuineness of his emotional reaction, and arguments about why he considered the possibility of preemptive nuclear attacks on civilian targets to be immoral. The BOI clearly never addressed the issue of substandard performance for which plaintiff was ultimately discharged. Nor did it discuss whether or not plaintiff’s compliance with AFR 35-99 in alerting his superiors to his inability to “turn the key” was substandard performance.22
Because the grounds for discharge were not the same for the proceedings under AFRs 36-2 and 36-3, it is inescapable that the initial notification of proceedings did not provide plaintiff with adequate notice. Kochanny v. Bureau of Alcohol, Tobacco and Firearms, 694 F.2d 698 (Fed.Cir.1982); Hanratty v. Federal Aviation Admin., 780 F.2d 33 (Fed.Cir.1985); Snakenberg v. United States, 15 Cl.Ct. 809 (1988). Therefore, the court concludes, that plaintiff was denied due process when he was not apprised of and, therefore, was unable to defend against, the ultimate basis for his dismissal.
Finally, the court will consider whether the AFBCMR considered all of the relevant evidence it had before it. Clearly, the Correction Board failed to consider whether plaintiff’s discharge violated AFR 35-99.23 This is the very issue addressed in Tilley v. United States, 19 Cl.Ct. 33 (1989). That case is dispositive and controlling of this issue.24
[21]*21In summary, it may be noted that AFR 35-99, ¶ 2-5, requires individuals assigned to PRP duties to monitor their own reliability for missile duty. Each individual “must advise supervisors of all factors (including medical or dental care) that could have an adverse impact on their performance and safety.” AFR 35-99, II2-5. Such action is required even though it may adversely affect that individual by resulting in their suspension, temporary decertification or permanent decertification from PRP duties. AFR 35-99, ¶15-10 concerns the disposition of permanently decertified personnel, such as both Tilley and plaintiff:
a. Restrictions on Disposition:
(1) Punitive action is not to be taken against personnel solely because of their failure to qualify or to remain qualified under this program. The member’s record will not contain any adverse comments based solely on the decertification.
(2) The cause for permanent decertification may also require other administrative or punitive action. Decertification is not to be used to justify, or to avoid, appropriate proceedings under the UCMJ or other existing directives governing administrative processing or separation.
******
(4) Members permanently decertified because of substandard conduct or diagnosis of character and behavior disorder should be considered for separation under governing directives.
******
b. Reassignment and Retraining:
A member permanently decertified from PRP duty may be an effective worker in another duty assignment where the conditions of stress are not as great, or the nature of the duty not so critical. When it is impractical or impossible to effectively utilize the individual in non-PRP duties within his or her AFSC, the individual must be promptly retrained into a new AFSC where he or she can be assigned to duty not covered by this regulation.
(Emphasis added.) AFR 35-99, H 5-10.
In Tilley, the court addressed the issue of whether or not the Air Force could ignore AFR 35-99 and discharge an officer solely for statements of moral reservation related to the United States’ nuclear weapons policy. The court incorporates that opinion by reference.
There are few distinguishing characteristics between the plaintiff in Tilley and plaintiff in the present case. Both officers had consistently performed in a superior manner prior to their decertification. Plaintiff continued to do so during the period of time he was assigned to Grand Forks AFB, as well as during his subsequent reenlistment as a noncommissioned officer. The sole basis for each plaintiff’s discharge was his statements regarding the United States’ nuclear weapons policy.25
Defendant attempts to distinguish the two cases by arguing that Gifford’s discharge was not based upon his decertification. “[N]o language referencing decertifi-cation appears in the Statement of Reasons for his discharge.” D’s. Br. pg. 2. Additionally, it argues that “but for a brief period of concern about the United States’ nuclear weapons policy, based upon a mistaken understanding of that policy, he [Til-ley] was always ready to execute a properly authenticated launch order.”26 D’s. Br. [22]*22pg. 2. In contrast, without any basis in fact in this record, defendant argues, “plaintiff refused to perform the full range of military duties.” D’s. Br. pg. 2.
Defendant’s arguments are without merit. The only behavior defendant can point to in substantiation of plaintiff's discharge, is the same type of behavior which was the basis for plaintiff’s discharge in Til-ley—statements of moral compunction regarding an inability to comply with an authenticated launch order. In light of this court’s decision in Tilley, while “such a statement ... may and perhaps should cause decertification under AFR 35-99, ... at the least it must also result in reassignment or retraining under AFR 35-99.” Til-ley v. United States, 19 Cl.Ct. 33 (1989). The Air Force cannot continue to represent in AFR 35-99 that decertification for a compelled statement of moral compunction will not necessarily result in adverse action against an officer, when in actuality, it considers such behavior alone as a sufficient basis for discharge proceedings (see footnote 15).
Clearly, in light of the court’s findings, the AFBCMR acted arbitrarily and capriciously when it erroneously concluded that it was permissible to ignore a pertinent regulation, AFR 35-99, and to substitute the procedures in one regulation for those in another without notice to plaintiff, when those procedures granted the concerned officer different rights and contained separate and distinct bases for discharge.
The final issue raised by the parties relates to plaintiff’s disputed OER. The court agrees with the AFBCMR that AFR 36-1027 does not absolutely prohibit including in an OER, evaluations based upon incidences from outside of the rating period, or from other than personal observation.
As a rule, don’t allow incidents that occurred outside the reporting period to influence the report. If an incident that occurred before the reporting period comes to your attention, you may include it in the report if it adds significant information that has not previously been reported. (Emphasis added.) AFR 36-10, 111-5.
Purposeful observation must form the basis of evaluations and include direct observation of the officer’s behavior and performance of duty____ Sometimes, however, only the results of the officer’s work or facts obtained from other sources are available. (Emphasis added.) AFR 36-10, 111-4.
Nor does the court believe that the mere mention in a training report of an incident,28 where the report does not fully relate the effect of such incident on an officer’s judgment, leadership, or other pro[23]*23fessional qualities, precludes consideration of this incident in a subsequent OER where said OER is the first opportunity to relate such incident to these characteristics.29
However, AFR 36-10, ¶ 3-14a also cautions raters not to consider or refer to:
Charges preferred, investigations, reviews by boards of evaluation or inquiry, or any similar actions related to the officer that are not complete as of the closeout date, or information obtained solely through such incomplete actions. Facts obtained from other sources, such as personal knowledge or observation, may be included. (Emphasis added.) Plaintiff alleges that the February 1983
OER included comments which referred to an incomplete administrative proceeding. The AFBCMR, in its October 21, 1987 Record of Proceedings, somewhat touched on this issue when it stated on page 3 of its decision that “[W]hile the indorser [Col. McAndrews] referred [in the OER] to testimony given on 4 November 1982 [at the BOI hearing], this testimony does not appear to be the sole source for his observations.”30 However, the only source the court could identify for Col. McAndrews’ observations, other than the BOI transcripts, was stated in his testimony before the BOI. When Col. McAndrews was asked on direct examination “[h]ave you had a chance to talk with Lieutenant Gif-ford or what do you know about the evidence in this case ...” he responded, “No I have not talked with Lieutenant Gif-ford— My knowledge of the case was derived from a review of the file and all of the correspondence, of course, that transpired between his [plaintiff’s] immediate commander [Lt. Col Nelson] and Col. Horton.” 31 It appears likely, based upon this statement, that Col. McAndrews may have impermissibly considered these materials related to the on-going investigation in violation of AFR 36-10, ¶ 3-14a, when evaluating plaintiff for his February 1983 OER. This conclusion is particularly evidenced by his reference therein to the BOI testimony. In any event, his comment referring to that testimony alone, regardless of the source for his other comments, would appear to violate that regulation.
Rather than make a determination of the validity of Col. McAndrews’ comments itself, the court has determined to remand this issue to the AFBCMR pursuant to RUSCC 60.1(a)(1). In addition to addressing the issue discussed above, with regard to the statements of the additional rater, Lt. Col. Nelson, the court strongly encourages the Correction Board to carefully review AFR 35-99, H 5-10; AFR 35-99, cited above, which states that a member’s record will not contain any adverse comments based solely on decertification.32 While AFR 36-10 may permit comments in an OER related to the behavior which resulted in plaintiff’s decertification, it appears to this court that AFR 35-99 may prohibit them.
CONCLUSION
In summary, this court finds that it has jurisdiction to review the procedural [24]*24aspects of an AFBCMR final decision. Further, the court finds that even when viewed in a light most favorable to defendant, and with the degree of deference to be accorded decisions of military boards, the AFBCMR’s decision to uphold plaintiff’s discharge was arbitrary, capricious and contrary to law in that it was made in disregard of legal precedent and relevant AFR regulations, and it violated plaintiff’s right to due process. Moreover, plaintiff’s discharge was in contravention of AFR 35-99. Finally, plaintiff has shown that the AFBCMR failed to adequately consider AFR 36-10, 113-14a when it upheld plaintiff’s disputed OER. Accordingly, defendant’s motion to dismiss or in the alternative for summary judgment is denied, and plaintiff's cross-motion for summary judgment is granted in part. However, the court will defer its ruling upon the issue of the validity of plaintiff’s disputed OER. Accordingly, that issue is remanded to the AFBCMR for a reexamination and more definitive determination under applicable regulations.
IT IS ORDERED, as follows:
1. Pursuant to RUSCC 60.1(a)(1), the issue of the validity of plaintiff’s February 1983 OER is remanded to the AFBCMR.
2. In light of this courts’ findings the Correction Board shall review the evidence with regard to AFRs 35-99 and 36-10 to determine if the ratings and comments of the additional rater and the indorser violated those regulations.
3. The court’s ruling upon the parties’ cross-motions for summary judgment as to this issue is deferred to permit the AFBCMR’s reexamination and determination of this issue.
4. Proceedings in this court are stayed until September 30,1991, by which time the AFBCMR shall issue and transmit its decision to the Clerk of the Court pursuant to RUSCC 60.1(b)(3).
5. Any notice pursuant to RUSCC 60.-1(b)(4) shall be filed by October 31, 1991.