Duke University v. Biomarin Pharmaceutical Inc.

685 F. App'x 967
CourtCourt of Appeals for the Federal Circuit
DecidedApril 25, 2017
Docket2016-1106
StatusUnpublished

This text of 685 F. App'x 967 (Duke University v. Biomarin Pharmaceutical Inc.) is published on Counsel Stack Legal Research, covering Court of Appeals for the Federal Circuit primary law. Counsel Stack provides free access to over 12 million legal documents including statutes, case law, regulations, and constitutions.

Bluebook
Duke University v. Biomarin Pharmaceutical Inc., 685 F. App'x 967 (Fed. Cir. 2017).

Opinion

Lourie, Circuit Judge.

Duke.University (“Duke”) appeals from the decision of the U.S. Patent and Trademark Office (“PTO”) Patent Trial and Appeal Board (“Board”) in an inter partes review (“IPR”) holding claims 1-9, 11, 12, 15, and 18-21 of U.S. Patent 7,056,712 (the “’712 patent”) unpatentable. See BioMarin Pharm. Inc. v. Duke Univ., No. IPR2013-00535, 2015 WL 1009196 (P.T.A.B. Feb. 23, 2015) (“Board Decision”), aff'd on reh’g, 2015 WL 4467381 (P.T.A.B. July 14, 2015) (“Rehearing Decision”). Because the Board erred in holding claims 9 and 19 unpatentable, but did not otherwise err, we affirm, in part, reverse in part, vacate in part, and remand.

Background

I. The ’712 Patent

Duke owns the ’712 patent, directed to methods for treating glycogen storage disease type II (“GSD-II” or “Pompe disease”) using enzyme replacement therapy. ’712 patent col. 2 11. 45-50. Pompe disease is a genetic disorder affecting muscles caused by a deficiency of acid a-glucosi-dase (“GAA”), a lysosomal enzyme that breaks down glycogen. Id. col. 1 11. 12-15. The deficiency results in the accumulation of lysosomal glycogen in most of the body’s tissues and most seriously affects the cardiac and skeletal muscles. Id. col. 1 11. 20-22.

Pompe disease has multiple forms. Id. col. 1 11. 28-44. The most severe form is infantile, which is characterized by less than 1% of normal GAA activity. Id. Affected individuals with the infantile form usually die of cardiac failure by one year of age. Id.

The ’712 patent describes the successful treatment of three infants suffering from infantile Pompe disease by administering recombinant human GAA (“rhGAA”) twice weekly to the infants. Id. col. 2 11. 50-55, col. 6 1. 59-col. 12 1. 26. The patent discloses that the “rhGAA was purified pri *969 marily as the 110-kD precursor protein” and was produced in Chinese hamster ovary (“CHO”) cell cultures. Id. col. 8 11. 48-55. The patent explains that administration in “precursor form” is a “preferred embodiment” because “the precursor contains motifs which allow efficient receptor-mediated update of GAA.” Id. col. 3 11. GO-GS; see also id. col. 2 11. 4-9. Additionally, rhGAA produced in CHO cells is “a particularly preferred embodiment.” Id. col. 4 11. 1-4.

The treated “infants demonstrated improvement of cardiac status, pulmonary function, and neurodevelopment, as well as reduction of glycogen levels in tissue.” Id. col. 2 11. 53-55; see also id. col. 9 1. 64-col. 121.14. Two of the three infants developed anti-rhGAA antibodies after the initiation of enzyme replacement therapy. Id. col. 9 11. 54-59, Figs. 1A-1C. As the amount of anti-rhGAA antibodies increased in the two infants, the “clinical improvements (noted early during therapy ,..) were no longer advancing.” Id. col. 9 11. 59-61.

The ’712 patent teaches that GAA can be administered in conjunction with other agents, e.g., “immunosuppressants or other immunotherapeutic agents which counteract anti-GAA antibodies.” Id. col. 5 11. 29-33. It states that “[i]n a particularly preferred embodiment, the immunosup-pressive or immunotherapeutic regime is begun prior to the first administration of GAA, in order to minimize the possibility of production of anti-GAA antibodies.” Id. col. 511. 55-59.

Claims 1 and 20 are the only independent claims, are illustrative of what is claimed, and read as follows:

1. A method of treating glycogen storage disease type II in a human individual having glycogen storage disease type II, comprising administering to the individual a therapeutically effective amount of human acid a-glucosidase periodically at an administration interval, wherein the human acid a-glucosidase was produced in chínese [sic] hamster ovary cell cultures.

Id. col. 12 11. 45-51.

20. A method of treating cardiomyopa-thy associated with glycogen storage disease type II in an human individual having glycogen storage disease type II, comprising administering to the individual a therapeutically effective amount of human acid a-glucosidase periodically at an administration interval, wherein the human acid a-glucosidase was produced in Chinese [sic] hamster ovary cell culture.

Id. col; 1411.13-19.

Claims 9 and .18 depend from claim 1. Claim 9 contains the additional limitation “wherein the human acid a-glucosidase is a 'precursor of recombinant human acid a-glucosidase that has been produced in chí-nese [sic] hamster ovary cell cultures.” Id. col. 13 11. 9-12 (emphasis added). Claim 18 adds “wherein the human acid a-glucosi-dase is administered in conjunction with an immunosuppressant.” Id. col. 14 11. 7-9. Claim 19 depends from claim 18 and further adds “wherein the immunosuppres-sant is administered prior to any administration of human acid a-glucosidase to the individual.” Id. col. 1411.10-12 (emphasis added).

II. The Board’s Final Written Decision

BioMarin Pharmaceutical Inc. (“BioMa-rin”) filed a petition for IPR of claims 1-9, 11, 12, 15, and 18-21 of the ’712 patent. The Board instituted review and ultimately held that all of the challenged claims are unpatentable as anticipated by U.S. Patent 7,351,410 (“van Bree”) and/or as obvious over PCT Publication WO 97/05771 (“Reu-ser”) in view of Johan L.K. Van Hove et al., Purification of Recombinant Human Precursor Acid a-Glucosidase, 43(3) Bio *970 CHEMISTRY AND MOLECULAR BlOLOGY INTERNATIONAL 613-23 (1997) (“Van Hove”) either alone or in combination with other references, including Roscoe O. Brady et al., Management of Neutralizing Antibody to Ceredase in a Patient with Type 3 Gaucher Disease, 100(6) Pediatrics ell (1997) (“Brady”).

The Board construed certain claim limitations, including “precursor” in claim 9 and “administered prior to any administration” in claim 19. The Board noted that Duke “proposes that the term ‘precursor’ in claim 9 means ‘any precursor of recombinant hGAA (e.g. a 110-kD form)’ that is ‘exclusively ... produced in CHO cell cultures.’ ” Board Decision, 2015 WL 1009196, at *4 (alteration in original). The Board “agree[d]” with this construction, but clarified that “[n]either claim 1 nor claim 9 precludes administering a non-precursor form of hGAA or rhGAA....” Id. The Board construed “administered prior to any administration” in claim 19 “to refer to administering an immunosuppressant prior to the first administration of hGAA to the individual.” Id.

A. The Prior Art

van Bree and Reuser disclose methods of producing rhGAA in transgenic mammals and its use in enzyme replacement therapy to treat Pompe disease, van Bree col.'2 11. 33-36, col. 4 11. 54-55; Reuser p. 4 11.

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685 F. App'x 967, Counsel Stack Legal Research, https://law.counselstack.com/opinion/duke-university-v-biomarin-pharmaceutical-inc-cafc-2017.