Arbutus Biopharma Corporation v. Modernatx, Inc.

65 F.4th 656
Court of Appeals for the Federal Circuit·Decided April 11, 2023·No. 20-1183·Published·Cited by 3 cases

Opinion

United States Court of Appeals for the Federal Circuit

ARBUTUS BIOPHARMA CORPORATION, FKA PROTIVA BIOTHERAPEUTICS, INC., Appellant

v.

MODERNATX, INC., FKA MODERNA THERAPEUTICS, INC., Appellee

2020-1183

Appeal from the United States Patent and Trademark Office, Patent Trial and Appeal Board in No. IPR2018- 00680.

Decided: April 11, 2023

DAVID I. BERL, Williams & Connolly LLP, Washington, DC, argued for appellant. Also represented by JESSICA PALMER RYEN; SONJA ROCHELLE GERRARD, MICHAEL T. ROSATO, Wilson Sonsini Goodrich & Rosati, Seattle, WA; LORA MARIE GREEN, Gemini Law LLP, Washington, DC.

AMY K. WIGMORE, Wilmer Cutler Pickering Hale and Dorr LLP, Washington, DC, argued for appellee. Also represented by NORA N. XU; MARK CHRISTOPHER FLEMING, 2 ARBUTUS BIOPHARMA CORPORATION v. MODERNATX, INC.

ANASTASIA GREENBERG, MADELEINE C. LAUPHEIMER, EMILY R. WHELAN, Boston, MA.

Before REYNA, SCHALL, and CHEN, Circuit Judges.

REYNA, Circuit Judge.

Appellant Arbutus Biopharma Corporation appeals a final written decision in an inter partes proceeding of the Patent Trial and Appeal Board that found claims 1–22 of U.S. Patent No. 9,404,127 invalid as anticipated. On appeal , Arbutus Biopharma Corporation challenges the Board’s anticipation finding. We affirm.

BACKGROUND Protiva Biotherapeutics, once a wholly owned subsidiary of—and is now amalgamated into—Appellant Arbutus Biopharma Corporation (“Arbutus”), owned U.S. Patent No. 9,404,127 (the “’127 patent”). See Moderna Therapeutics , Inc. v. Protiva Biotherapeutics, Inc., No. IPR2018- 00680, 2019 WL 12447121, at *1 & n.2. (P.T.A.B. Sept. 10, 2019) (“Decision”). The ’127 patent was filed on March 9, 2015 and claims priority to Application No. 61/360,480 that was filed on June 30, 2010. Id. at *1. The ’127 patent issued on August 2, 2016, listing three co-inventors: Ed Yaworski , Lloyd B. Jeffs, and Lorne R. Palmer. Id. It is directed to an invention that provides stable nucleic acid- lipid particles (“SNALP”) that have a non-lamellar structure and “comprise a nucleic acid . . . methods of making the SNALP, and methods of delivering and/or administering the SNALP.” Id. at *2 (quoting ’127 patent, Abstract). The three-dimensional structure of SNALP is a physical property that has one of two morphologies: lamellar or non- lamellar. Appellee’s Br. 6–8.

ARBUTUS BIOPHARMA CORPORATION v. MODERNATX, INC. 3

Id. A lamellar morphology is one in which sheets of lipid bilayers are arranged in layers (shown above in the picture on the left). Appellee’s Br. 6. A non-lamellar form refers to a non-bilayer morphology of the particles, an example of which is an inverse hexagonal structure (shown above in the picture on the right). Id. at 7–8; Decision at *2 n.5.

The ’127 patent states that its purpose is to allow for more efficient methods and compositions for introducing nucleic acids into cells and methods of downregulating gene expression. ’127 patent, col. 2 ll. 54–61. The invention is, in part, the “surprising discovery” of the Morphology Limitation when one controls two factors: the lipid compositions of a SNALP formulation and formation process . ’127 patent, col. 2 ll. 64–col. 3 l. 1. Thus, the physical property or morphology of the particles depends on two factors : (1) the lipids used for making the formulations and (2) the process used to form the particles. Appellant’s Br. 5–6; Appellee’s Br. 8–9. The ’127 patent identifies five formulations of various compositions that can be prepared by either Stepwise Dilution Method (“SDM”) or Direct Dilution Method (“DDM”). Decision at *2; ’127 patent, Tables 1, 3; col. 104 ll. 44–60; col. 105 ll. 53–64. These formulations are 1:62, 1:57, 2:40, 2:30, and 10:15, with the first two being the most relevant to this case. Decision at *2. The 4 ARBUTUS BIOPHARMA CORPORATION v. MODERNATX, INC.

numbers refer to molar percentages of the conjugated lipid and cationic lipid, respectively. Decision at *2 n.6.

The ’127 patent incorporates by reference U.S. Patent Publication No. 2007/0042031 (the “’031 publication”) to describe DDM and the apparatuses for carrying out DDM. ’127 patent, col. 16 ll. 27–31, col. 93 ll. 14–18, col. 104 ll. 32–37. It also incorporates by reference Publication No. 2004/0142025 to describe SDM and the apparatuses for carrying out for carrying out SDM. ’127 patent, col. 16 ll. 27–31, col. 93 ll. 47–50, col. 104 ll. 9–22. The disclosure for each incorporated patent or publication is “in its entirety for all purposes.” ’127 patent, col. 104 ll. 9–22, 32– 37. Independent Claim 1 is representative:

1. A composition comprising: a plurality of nucleic acid-lipid particles, wherein each particle in the plurality of particles comprises: (a) a nucleic acid; (b) a cationic lipid; (c) a non-cationic lipid; and (d) a conjugated lipid that inhibits aggregation of particles, wherein at least about 95% of the particles in the plurality of particles have a non-lamellar morphology. [Morphology Limitation]

’127 patent, col. 149 ll. 29–37.

PROCEDURAL HISTORY Appellee Moderna Therapeutics (“Moderna”) filed a petition for inter partes review (“IPR”) challenging claims 1– 22 of the ’127 patent, and review was instituted on September 12, 2018. Decision at *1. Moderna argued that U.S. Patent No. 8,058,069 (the “’069 patent”), which was filed on April 15, 2009 and claims priority to Application No. 61/045,228 that was filed on April 15, 2008, anticipated every claim. Id. at *7. The ’069 patent lists five inventors,

ARBUTUS BIOPHARMA CORPORATION v. MODERNATX, INC. 5

three of which are listed on the ’127 patent. Id. The ’069 patent, its child patent (U.S. Patent No. 9,364,435 (the “’435 patent”)), and the ’127 patent, are all commonly owned by Arbutus. Id. While the ’127 patent was filed during the pendency of the ’069 patent, it does not claim priority to it. Id. at *7 n.16.

BOARD’S FINAL WRITTEN DECISION The Patent Trial and Appeal Board (“Board”) instituted the IPR and issued a final written decision (“FWD”) finding all 22 claims anticipated by the ’069 patent (“’069 patent” or “prior art patent”). Id. at *1. In doing so, it found the ’069 patent to be prior art to the ’127 patent. 1 Id. at *9, 12. The Board then found several of the same components between the two patents. Both patents: are directed to the same purpose (providing SNALP, methods of making and delivering SNALP); disclose at least the 1:57 and 1:62 formulations; explain that SNALP can be formed by any method in the art including direct dilution, and direct the reader to rely on the ’031 publication for details on using DDM. Id. at *7–8; ’069 patent, col. 57 ll. 50–55.

The Board’s FWD also addressed several incorporated references. The ’031 publication is incorporated by reference in both the ’127 and ’069 patents. Decision at *2, 7–8. Several other references—including U.S. Patent Publication No. 2006/0083780 (the “’780 publication”), U.S. Patent Publication No. 2004/0142025 (the “’025 publication”), and U.S. Patent No. 5,885,613 (the “’613 patent”)—were incorporated by reference in the ’069 patent, each “in its entirety for all purposes.” ’069 patent, col. 11 ll. 62–64, col. 51 ll. 58–61, col. 58 ll.18–21, col. 47 ll. 59–64. The Board found that the disclosure of the ’069 patent thus includes the

1 Protiva did not dispute that the ’069 patent was prior art under pre-AIA 35 U.S.C. § 102(e)(2). Decision at *7 n.15.

6 ARBUTUS BIOPHARMA CORPORATION v. MODERNATX, INC.

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